DatasetSet_04_DMpreB_versus_WTpreB.phenotype_DMpreB_versus_WTpreB.cls
#DMpreB_versus_WTpreB
Phenotypephenotype_DMpreB_versus_WTpreB.cls#DMpreB_versus_WTpreB
Upregulated in classWTpreB
GeneSetNCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY
Enrichment Score (ES)-0.6666101
Normalized Enrichment Score (NES)-1.7094414
Nominal p-value0.0
FDR q-value0.010424511
FWER p-Value0.089
Table: GSEA Results Summary



Fig 1: Enrichment plot: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1BAX178326444.463-0.0074No
2CYCS88217444.1200.0125No
3CTSD229943.3320.0194No
4MAPK8645916442.061-0.0030No
5BID17017 43519541.590-0.0100No
6BAG4743121211.411-0.0103No
7BCAR11874122251.277-0.0080No
8PRKCZ526022811.203-0.0036No
9PAWR19885 65824461.028-0.0062No
10HRAS486826100.906-0.0094No
11SLC9A3R223089 1544 151430240.543-0.0284No
12ITGB32063130430.531-0.0262No
13VEGFA2296933500.369-0.0404No
14FADD17536 8950 471136660.282-0.0557No
15GNAI1902437800.255-0.0603No
16SHC19813 9812 543039360.225-0.0673No
17GNAQ4786 23909 368541360.194-0.0769No
18AKT1856842180.183-0.0801No
19GNAZ7142280.182-0.0795No
20BCL28651 3928 13864 4435 981 4062 13863 402743800.162-0.0867No
21FYN3375 3395 2005250720.109-0.1233No
22SNX1523993 376152220.100-0.1308No
23SPHK15484 1266 140254730.088-0.1438No
24SRC550757270.076-0.1570No
25IGF13352 9156 340964110.055-0.1936No
26GNAO14785 382969260.044-0.2211No
27PTGS25317 965571020.040-0.2303No
28STAT5B2022273250.036-0.2421No
29PAK1952775900.031-0.2562No
30SHB1049377140.029-0.2626No
31HIF1A485077460.029-0.2641No
32NCK19447 515278190.028-0.2679No
33KDR1650980270.024-0.2789No
34GRB10479980360.024-0.2792No
35PDGFB22199 231182070.022-0.2882No
36GNA142390782140.022-0.2884No
37RHOA8624 4409 441082610.021-0.2908No
38PTPN22341483060.020-0.2930No
39GNA12902385970.016-0.3086No
40ACP1431792300.009-0.3427No
41PTPN115326 16391 966093600.007-0.3497No
42FLT13483 162879989-0.001-0.3836No
43IRS1492510290-0.005-0.3998No
44CDC424503 8722 4504 246510407-0.006-0.4060No
45LYN1628110463-0.007-0.4090No
46CRADD1964010936-0.013-0.4344No
47YES1593010960-0.014-0.4356No
48LRP1928411848-0.027-0.4833No
49PLCB2526211963-0.029-0.4893No
50DOK117104 1018 117712045-0.031-0.4935No
51EGF1516912130-0.033-0.4978No
52PIK3R1317012502-0.041-0.5177No
53PLCG11475312675-0.046-0.5267No
54SOS1547613046-0.056-0.5463No
55GNAI31519813219-0.062-0.5552No
56SPHK21217 1806 1215513302-0.065-0.5593No
57PDGFRB2353913453-0.070-0.5670No
58PIK3CA956213540-0.075-0.5711No
59ASAH13835 3853 863013543-0.075-0.5708No
60TNF2300413668-0.082-0.5770No
61ABL12693 4301 279414050-0.106-0.5969No
62GRB72067314124-0.112-0.6002No
63PDGFA523714395-0.140-0.6139No
64CBL1915414602-0.166-0.6241No
65FOS2120214800-0.201-0.6335No
66SMPD31875714820-0.203-0.6333No
67MAP2K21993314908-0.221-0.6366No
68GNA151967114942-0.226-0.6370No
69VAV25848 267014978-0.236-0.6375No
70JAK223893 9197 370615111-0.267-0.6430No
71STAT5A2066415113-0.268-0.6414No
72AIFM12558 2416115116-0.268-0.6398No
73MAP2K11908215318-0.325-0.6487No
74MYC22465 943515334-0.330-0.6475No
75LCK1574615440-0.368-0.6509No
76TNFRSF1A1181 1020615447-0.370-0.6490No
77CDH51851215470-0.378-0.6478No
78FGR472315758-0.526-0.6601No
79MAP4K41124115849-0.588-0.6614No
80ITGAV493115941-0.673-0.6622Yes
81HCK1478715979-0.695-0.6599Yes
82RIPK1538116037-0.757-0.6584Yes
83PTPN1532516168-0.897-0.6599Yes
84TRAF21465716252-0.981-0.6584Yes
85PTPRJ966416387-1.089-0.6589Yes
86NCK2944816530-1.250-0.6589Yes
87RAC11630216651-1.434-0.6566Yes
88BIRC31924716725-1.544-0.6511Yes
89AKT313739 98216769-1.612-0.6436Yes
90RASA11017416815-1.689-0.6356Yes
91MAPK36458 1117016931-1.809-0.6308Yes
92SMPD118145 265816969-1.861-0.6213Yes
93CASP8869417013-1.927-0.6119Yes
94MAP2K42040517051-1.981-0.6017Yes
95RAF11703517131-2.125-0.5929Yes
96SGPL11975717239-2.305-0.5846Yes
97PRKCD2189717290-2.395-0.5726Yes
98MAPK142331317421-2.682-0.5632Yes
99BAD2400017524-2.914-0.5508Yes
100SGPP12103917527-2.920-0.5330Yes
101GRB22014917590-3.055-0.5177Yes
102PRKRA35717594-3.069-0.4990Yes
103JUN1583217687-3.335-0.4835Yes
104GNA132061717715-3.402-0.4641Yes
105SLC9A3R11125017768-3.541-0.4452Yes
106NFKB11516017789-3.591-0.4243Yes
107GNA113300 3345 1967017835-3.697-0.4041Yes
108NFKBIA2106517838-3.699-0.3815Yes
109RELA2378317959-4.092-0.3629Yes
110PTEN530518200-4.996-0.3452Yes
111GAB11882818283-5.430-0.3164Yes
112STAT13936 552418294-5.505-0.2832Yes
113CSK880518359-5.871-0.2506Yes
114BLK3205 2179118378-5.983-0.2149Yes
115MAP3K12134818411-6.282-0.1781Yes
116STAT35525 990618455-6.760-0.1390Yes
117DNM24635 310318471-6.991-0.0969Yes
118CXCR41384418551-7.968-0.0524Yes
119MAPK11642 1116718592-9.1040.0013Yes
Table: GSEA details [plain text format]



Fig 2: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY: Random ES distribution   
Gene set null distribution of ES for NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY